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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10872920 chr14:39777295 T/C LOC647288 chr13:75811890-75814517:- 0.41 6.97 1.4E-11 Box Plot
BLCA rs10873294 chr14:77165690 A/T LOC100130932 chr19:14599758-14600688:+ 0.38 6.43 3.87E-10 Box Plot
BLCA rs10876870 chr12:56478002 A/C RPS26P11 chrX:71264395-71264742:+ -0.44 -7.5 4.55E-13 Box Plot
BLCA rs10882833 chr10:98390412 A/T LILRB1 chr19:55128612-55148979:+ -0.37 -6.25 1.07E-9 Box Plot
BLCA rs10893413 chr11:125561001 C/T DLAT chr11:111895538-111935114:+ -0.63 -6.03 3.86E-9 Box Plot
BLCA rs10893413 chr11:125561001 C/T NFRKB chr11:129733531-129765485:- -0.72 -6.55 1.91E-10 Box Plot
BLCA rs10893413 chr11:125561001 C/T TIMM8B chr11:111955524-111957522:- -0.59 -5.96 5.61E-9 Box Plot
BLCA rs10893413 chr11:125561001 C/T ZW10 chr11:113603909-113644533:- -0.61 -6.16 1.82E-9 Box Plot
BLCA rs10903158 chr1:121182423 G/A NBPF14 chr1:148003642-148025863:- 0.28 6.19 1.51E-9 Box Plot
BLCA rs10903159 chr1:121181997 G/T NBPF14 chr1:148003642-148025863:- 0.28 6.19 1.51E-9 Box Plot
BLCA rs10903161 chr1:121178741 A/T NBPF14 chr1:148003642-148025863:- 0.28 6.23 1.24E-9 Box Plot
BLCA rs10903162 chr1:121169217 C/T NBPF14 chr1:148003642-148025863:- 0.29 6.44 3.58E-10 Box Plot
BLCA rs10939013 chr4:24903015 G/A PDZD8 chr10:119036785-119134978:- -0.25 -6.05 3.52E-9 Box Plot
BLCA rs10946834 chr6:26533664 G/C ZNF322B chr9:99957633-99961910:- 0.46 8.02 1.27E-14 Box Plot
BLCA rs10946835 chr6:26533757 C/T ZNF322B chr9:99957633-99961910:- 0.46 8.02 1.27E-14 Box Plot